ECOD: domain e1ygyA3

Domain ID e1ygyA3

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: NAD(P)-binding Rossmann-fold domains
F: 2-Hacid_dh_C

UID:	000009146
Type:	Manual and representative domain
Range:	A:99-282
PDB:	1ygy
PDB Description:	D-3-phosphoglycerate dehydrogenase
UniProt:	P9WNX3
Hsap BLAST neighbor:	O43175
Species:	Mycobacterium tuberculosis

Domains in the same chain:

Download Pymol

e1ygyA4	A:3-98,A:283-316	Rossmann-like	Rossmann-related	Formate/glycerate dehydrogenase catalytic domain-like
e1ygyA3	A:99-282	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e1ygyA2	A:317-451	FwdE/GAPDH domain-like	Serine dehydratase beta chain-like	Serine dehydratase beta chain-like
e1ygyA1	A:452-529	Alpha-beta plaits	ACT-like	ACT-like

Domains in the same PDB:

e1ygyA4	A:3-98,A:283-316	Rossmann-like	Rossmann-related	Formate/glycerate dehydrogenase catalytic domain-like
e1ygyA3	A:99-282	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e1ygyA2	A:317-451	FwdE/GAPDH domain-like	Serine dehydratase beta chain-like	Serine dehydratase beta chain-like
e1ygyA1	A:452-529	Alpha-beta plaits	ACT-like	ACT-like
e1ygyB4	B:3-98,B:283-316	Rossmann-like	Rossmann-related	Formate/glycerate dehydrogenase catalytic domain-like
e1ygyB3	B:99-282	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e1ygyB2	B:317-451	FwdE/GAPDH domain-like	Serine dehydratase beta chain-like	Serine dehydratase beta chain-like
e1ygyB1	B:452-529	Alpha-beta plaits	ACT-like	ACT-like

Structural contacts of domain e1ygyA3 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1ygyB3	A:X,Y,Z->B:x,y,z	Rossmann-related	Interaction Interface Pymol
e1ygyB4	A:X,Y,Z->B:x,y,z	Rossmann-related	Interaction Interface Pymol
e1ygyA2	A:x,y,z->A:-Y+1,-X+1,-Z+1/6	Serine dehydratase beta chain-like	Interaction Interface Pymol
e1ygyA2	A:-Y+1,-X+1,-Z+1/6->A:x,y,z	Serine dehydratase beta chain-like	Interaction Interface Pymol