Domain ID e1ypnA1

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  • A: a+b two layers
  • X: dsRBD-like
  • H: Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
  • T: Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
  • F: Porphobil_deamC
UID: 000070108
Type: Automatic domain
Parent: e1pdaA1
Range: A:220-306
Ligands: DPM
PDB: 1ypn
PDB Description: HYDROXYMETHYLBILANE SYNTHASE
UniProt: P06983
Hsap BLAST neighbor: P08397
Species: Escherichia coli

Structure of domain e1ypnA1

Structural contacts of domain e1ypnA1 of H-group "Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ypnA2 A:x,y,z->A:-X,-Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e1ypnA2 A:-X,-Y,Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e1ypnA3 A:x,y,z->A:-X+1/2,Y-1/2,-Z+1 Periplasmic binding protein-like II Interaction Interface Pymol
e1ypnA2 A:x,y,z->A:-X+1/2,Y-1/2,-Z+1 Periplasmic binding protein-like II Interaction Interface Pymol
e1ypnA2 A:x,y,z->A:-X+1/2,Y-1/2,-Z Periplasmic binding protein-like II Interaction Interface Pymol