Domain ID e1yq3A6

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  • A: alpha bundles
  • X: Spectrin repeat-like
  • H: Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
  • T: Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
  • F: Succ_DH_flav_C
UID: 001176810
Type: Automatic domain
Parent: e1kf6A1
Range: A:462-621
Ligands: UNL
PDB: 1yq3
PDB Description: Succinate dehydrogenase flavoprotein subunit
UniProt: Q9YHT1
Hsap BLAST neighbor: P31040
Species: Gallus gallus

Structure of domain e1yq3A6

Domains in the same chain:

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e1yq3A5 A:8-246,A:376-461 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e1yq3A4 A:247-375 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e1yq3A6 A:462-621 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain

Domains in the same PDB:

e1yq3A5 A:8-246,A:376-461 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e1yq3A4 A:247-375 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e1yq3A6 A:462-621 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
e1yq3B2 B:6-114 beta-Grasp Ubiquitin-related Ubiquitin-like
e1yq3B1 B:115-247 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin
e1yq3C1 C:2-141 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e1yq3D1 D:2-103 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits

Structural contacts of domain e1yq3A6 of H-group "Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1yq3B2 A:X,Y,Z->B:x,y,z Ubiquitin-related Interaction Interface Pymol
e1yq3A5 A:x,y,z->A:X-1/2,-Y+1/2,-Z+1 Rossmann-related Interaction Interface Pymol
e1yq3B1 A:X-1,Y,Z->B:x,y,z alpha-helical ferredoxin Interaction Interface Pymol