| UID: | 000159234 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1nekB1 |
| Range: | B:115-247 |
| Ligands: | BHG F3S HEM SF4 UNL UQ |
| PDB: | 1yq3 |
| PDB Description: | succinate dehydrogenase Ip subunit |
| UniProt: | Q9YHT2 |
| Hsap BLAST neighbor: | P21912 |
| Species: | Gallus gallus |
Structure of domain e1yq3B1
Domains in the same chain:
| e1yq3B2 | B:6-114 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
| e1yq3B1 | B:115-247 | alpha-helical ferredoxin-like | alpha-helical ferredoxin | alpha-helical ferredoxin |
Domains in the same PDB:
Structural contacts of domain e1yq3B1 of H-group "alpha-helical ferredoxin":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1yq3A5 | B:x,y,z->A:X,Y,Z | Rossmann-related | Interaction Interface Pymol |
| e1yq3C1 | B:X,Y,Z->C:x,y,z | Transmembrane heme-binding four-helical bundle | Interaction Interface Pymol |
| e1yq3D1 | B:X,Y,Z->D:x,y,z | Transmembrane heme-binding four-helical bundle | Interaction Interface Pymol |
| e1yq3A5 | B:x,y,z->A:X-1/2,-Y+1/2,-Z+1 | Rossmann-related | Interaction Interface Pymol |
| e1yq3A6 | B:x,y,z->A:X-1,Y,Z | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | Interaction Interface Pymol |
