Domain ID e1zm4C5

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: GTP_EFTU
UID: 000101610
Type: Automatic domain
Parent: e2c78A3
Range: C:3-343
PDB: 1zm4
PDB Description: ELONGATION FACTOR 2
UniProt: P32324
Hsap BLAST neighbor: P13639
Species: Saccharomyces cerevisiae

Structure of domain e1zm4C5

Domains in the same chain:

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e1zm4C5 C:3-343 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1zm4C1 C:344-481 cradle loop barrel RIFT-related Alanine racemase-C
e1zm4C2 C:482-560 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1zm4C4 C:561-725 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1zm4C3 C:726-842 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Domains in the same PDB:

e1zm4A5 A:3-343 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1zm4A1 A:344-481 cradle loop barrel RIFT-related Alanine racemase-C
e1zm4A2 A:482-560 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1zm4A4 A:561-725 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1zm4A3 A:726-842 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1zm4B1 B:399-602 ADP-ribosylation ADP-ribosylation ADP-ribosylation
e1zm4C5 C:3-343 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1zm4C1 C:344-481 cradle loop barrel RIFT-related Alanine racemase-C
e1zm4C2 C:482-560 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1zm4C4 C:561-725 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1zm4C3 C:726-842 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1zm4D1 D:399-602 ADP-ribosylation ADP-ribosylation ADP-ribosylation
e1zm4E5 E:3-343 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1zm4E1 E:344-481 cradle loop barrel RIFT-related Alanine racemase-C
e1zm4E2 E:482-560 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1zm4E4 E:561-725 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1zm4E3 E:726-842 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1zm4F1 F:399-602 ADP-ribosylation ADP-ribosylation ADP-ribosylation

Structural contacts of domain e1zm4C5 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1zm4A5 C:x,y,z->A:-X,Y,-Z P-loop domains-related Interaction Interface Pymol
e1zm4A5 C:-X,Y-1,-Z->A:x,y,z P-loop domains-related Interaction Interface Pymol
e1zm4A3 C:-X,Y-1,-Z->A:x,y,z EF-G C-terminal domain-like Interaction Interface Pymol
e1zm4E5 C:-X,Y-1,-Z->E:x,y,z P-loop domains-related Interaction Interface Pymol
e1zm4A5 C:x,y,z->A:X,Y,Z P-loop domains-related Interaction Interface Pymol