ECOD: domain e1zpdA3

Domain ID e1zpdA3

A: a/b three-layered sandwiches
X: Thiamin diphosphate-binding fold (THDP-binding)
H: Thiamin diphosphate-binding fold (THDP-binding)
T: Thiamin diphosphate-binding fold (THDP-binding)
F: TPP_enzyme_C

UID:	000010691
Type:	Manual and representative domain
Range:	A:363-566
Ligands:	DPX MG
PDB:	1zpd
PDB Description:	PYRUVATE DECARBOXYLASE
UniProt:	P06672
Species:	Zymomonas mobilis

Domain
In chain context
In PDB context

Structure of domain e1zpdA3

Domains in the same chain:

Download Pymol

e1zpdA2	A:2-187	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1zpdA1	A:188-362	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e1zpdA3	A:363-566	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e1zpdA2	A:2-187	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1zpdA1	A:188-362	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e1zpdA3	A:363-566	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1zpdB2	B:2-187	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1zpdB1	B:188-362	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e1zpdB3	B:363-566	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1zpdE2	E:2-187	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1zpdE1	E:188-362	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e1zpdE3	E:363-566	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1zpdF2	F:2-187	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1zpdF1	F:188-362	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e1zpdF3	F:363-566	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e1zpdA3 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1zpdB3	A:X,Y,Z->B:x,y,z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e1zpdB2	A:X,Y,Z->B:x,y,z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e1zpdB1	A:X,Y-1,Z->B:x,y,z	Rossmann-related	Interaction Interface Pymol