Domain ID e1zpdB1

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: DHS-like NAD/FAD-binding domain
  • F: TPP_enzyme_M
UID: 000099234
Type: Automatic domain
Parent: e2ez9A1
Range: B:188-362
Ligands: CIT
PDB: 1zpd
PDB Description: PYRUVATE DECARBOXYLASE
UniProt: P06672
Species: Zymomonas mobilis

Structure of domain e1zpdB1

Domains in the same chain:

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e1zpdB2 B:2-187 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1zpdB1 B:188-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e1zpdB3 B:363-566 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e1zpdA2 A:2-187 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1zpdA1 A:188-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e1zpdA3 A:363-566 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1zpdB2 B:2-187 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1zpdB1 B:188-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e1zpdB3 B:363-566 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1zpdE2 E:2-187 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1zpdE1 E:188-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e1zpdE3 E:363-566 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1zpdF2 F:2-187 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1zpdF1 F:188-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e1zpdF3 F:363-566 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e1zpdB1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1zpdA2 B:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e1zpdA1 B:x,y,z->A:X,Y-1,Z Rossmann-related Interaction Interface Pymol
e1zpdA3 B:x,y,z->A:X,Y-1,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol