Domain ID e2ag1D1

Download files:
  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: DHS-like NAD/FAD-binding domain
  • F: TPP_enzyme_M
UID: 000293926
Type: Automatic domain
Parent: e2ez9A1
Range: D:186-367
PDB: 2ag1
PDB Description: benzaldehyde lyase
UniProt: Q9F4L3
Species: Pseudomonas fluorescens

Structure of domain e2ag1D1

Domains in the same chain:

Download Pymol

e2ag1D3 D:3-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2ag1D1 D:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2ag1D2 D:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e2ag1A3 A:3-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2ag1A1 A:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2ag1A2 A:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2ag1B3 B:3-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2ag1B1 B:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2ag1B2 B:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2ag1C3 C:3-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2ag1C1 C:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2ag1C2 C:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2ag1D3 D:3-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2ag1D1 D:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2ag1D2 D:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e2ag1D1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ag1C3 D:x,y,z->C:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2ag1A1 D:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e2ag1A3 D:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2ag1D2 D:x,y,z->D:Y,X,-Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2ag1D2 D:Y,X,-Z->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2ag1C1 D:-X+1,-X+Y,-Z+1/3->C:x,y,z Rossmann-related Interaction Interface Pymol
e2ag1C2 D:-X+1,-X+Y,-Z+1/3->C:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol