Domain ID e2ajqF12

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: DNA_pol_A
UID: 001168792
Type: Automatic domain
Parent: e2hhvA3
Range: F:451-478,F:592-704
PDB: 2ajq
PDB Description: T7 DNA polymerase
UniProt: P00581
Species: Enterobacteria phage T7

Structure of domain e2ajqF12

Domains in the same chain:

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e2ajqF11 F:1-210 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2ajqF10 F:211-450 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e2ajqF12 F:451-478,F:592-704 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2ajqF9 F:479-591 helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Domains in the same PDB:

e2ajqA7 A:1-210 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2ajqA6 A:211-450 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e2ajqA8 A:451-478,A:592-704 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2ajqA5 A:479-591 helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I
e2ajqB1 B:3-107 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e2ajqF11 F:1-210 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2ajqF10 F:211-450 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e2ajqF12 F:451-478,F:592-704 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2ajqF9 F:479-591 helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I
e2ajqI1 I:3-107 Thioredoxin-like Thioredoxin-like Thioredoxin-like

Structural contacts of domain e2ajqF12 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ajqF12 F:x,y,z->F:-X,Y,-Z+1/2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2ajqF10 F:x,y,z->F:-X,Y,-Z+1/2 "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e2ajqF12 F:-X,Y,-Z+1/2->F:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2ajqF10 F:-X,Y,-Z+1/2->F:x,y,z "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e2ajqA6 F:x,y,z->A:-X,Y,-Z+1/2 "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e2ajqA5 F:x,y,z->A:-X,Y,-Z+1/2 helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol