Domain ID e2apoB1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Nucleolar RNA-binding protein Nop10-like
  • T: Nucleolar RNA-binding protein Nop10-like
  • F: Nop10p
UID: 000008060
Type: Manual and representative domain
Range: B:403-457
Ligands: ZN
PDB: 2apo
PDB Description: RIBOSOME BIOGENESIS PROTEIN NOP10
UniProt: P81303
Species: Methanocaldococcus jannaschii

Structure of domain e2apoB1

Structural contacts of domain e2apoB1 of H-group "Nucleolar RNA-binding protein Nop10-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2apoA2 B:x,y,z->A:X,Y,Z Pseudouridine synthase Interaction Interface Pymol
e2apoB1 B:x,y,z->B:-X,Y,-Z+1 Nucleolar RNA-binding protein Nop10-like Interaction Interface Pymol
e2apoB1 B:-X,Y,-Z+1->B:x,y,z Nucleolar RNA-binding protein Nop10-like Interaction Interface Pymol
e2apoA2 B:x,y,z->A:-X+1/2,Y-1/2,-Z+1 Pseudouridine synthase Interaction Interface Pymol
e2apoA2 B:x,y,z->A:-X,Y,-Z+2 Pseudouridine synthase Interaction Interface Pymol
e2apoA1 B:x,y,z->A:X-1/2,Y-1/2,Z RIFT-related Interaction Interface Pymol