Domain ID e2b64K1

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Ribosomal_S11
UID: 000114716
Type: Automatic domain
Parent: e2uubK1
Range: K:11-129
PDB: 2b64
PDB Description:
Hsap BLAST neighbor: P82912
Species:

Structure of domain e2b64K1

Domains in the same chain:

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e2b64K1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e2b64C2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2b64C1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2b64E1 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2b64E2 E:74-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2b64F1 F:1-97 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2b64G1 G:12-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2b64H1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2b64H2 H:67-137 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2b64J1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2b64K1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2b64L1 L:5-122 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2b64N1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2b64O1 O:3-87 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2b64P1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2b64R1 R:19-88 HTH HTH tri-helical
e2b64T1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e2b64Y4 Y:8-95 Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain
e2b64Y1 Y:96-204 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e2b64Y2 Y:202-287 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e2b64Y3 Y:288-354 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like

Structural contacts of domain e2b64K1 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2b64R1 K:X,Y,Z->R:x,y,z HTH Interaction Interface Pymol
e2b64G1 K:x,y,z->G:X,Y,Z Ribosomal protein S7 Interaction Interface Pymol