Domain ID e2b9mE2

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  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: Ribosomal_S5_C
UID: 000071174
Type: Automatic domain
Parent: e1pkpA2
Range: E:74-143
PDB: 2b9m
PDB Description:
Species:

Structure of domain e2b9mE2

Domains in the same chain:

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e2b9mE1 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2b9mE2 E:74-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e2b9mC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2b9mC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2b9mE1 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2b9mE2 E:74-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2b9mF1 F:1-97 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2b9mG1 G:12-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2b9mH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2b9mH2 H:67-137 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2b9mJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2b9mK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2b9mL1 L:5-122 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2b9mN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2b9mO1 O:3-87 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2b9mP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2b9mR1 R:19-88 HTH HTH tri-helical
e2b9mT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e2b9mY5 Y:1-108 Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain
e2b9mY2 Y:109-213 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e2b9mY3 Y:214-300 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e2b9mY4 Y:301-365 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like

Structural contacts of domain e2b9mE2 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2b9mH2 E:X,Y,Z->H:x,y,z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol