ECOD: domain e2b9oR1

Domain ID e2b9oR1

A: alpha arrays
X: HTH
H: HTH
T: tri-helical
F: Ribosomal_S18

UID:	000045100
Type:	Automatic domain
Parent:	e2uubR1
Range:	R:19-88
PDB:	2b9o
PDB Description:
Hsap BLAST neighbor:	Q9Y3D5
Species:

Domain
In chain context
In PDB context

Structure of domain e2b9oR1

Domains in the same chain:

Download Pymol

e2b9oR1	R:19-88	HTH	HTH	tri-helical

Domains in the same PDB:

e2b9oC2	C:2-106	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e2b9oC1	C:107-207	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e2b9oE1	E:5-72	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e2b9oE2	E:74-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2b9oF1	F:1-97	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6
e2b9oG1	G:12-156	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e2b9oH1	H:1-66	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e2b9oH2	H:67-137	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e2b9oJ1	J:3-100	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e2b9oK1	K:11-129	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2b9oL1	L:5-122	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2b9oN1	N:2-61	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e2b9oO1	O:3-87	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e2b9oP1	P:1-83	Ribosomal protein S16	Ribosomal protein S16	Ribosomal protein S16
e2b9oR1	R:19-88	HTH	HTH	tri-helical
e2b9oT1	T:8-106	Spectrin repeat-like	Ribosomal protein S20	Ribosomal protein S20

Structural contacts of domain e2b9oR1 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2b9oF1	R:x,y,z->F:X,Y,Z	Ribosomal protein S6	Interaction Interface Pymol
e2b9oK1	R:x,y,z->K:X,Y,Z	Ribonuclease H-like	Interaction Interface Pymol