Domain ID e2ba0A1

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: RRP4_S1
UID: 000000362
Type: Manual and representative domain
Range: A:53-135
PDB: 2ba0
PDB Description: Archaeal exosome RNA binding protein RRP4
UniProt: O29758
Species: Archaeoglobus fulgidus

Structure of domain e2ba0A1

Domains in the same chain:

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e2ba0A3 A:2-52 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e2ba0A1 A:53-135 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2ba0A2 A:136-219 Alpha-lytic protease prodomain-like KH-domains Eukaryotic type KH-domain (KH-domain type I)

Domains in the same PDB:

e2ba0A3 A:2-52 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e2ba0A1 A:53-135 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2ba0A2 A:136-219 Alpha-lytic protease prodomain-like KH-domains Eukaryotic type KH-domain (KH-domain type I)
e2ba0B3 B:2-52 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e2ba0B1 B:53-135 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2ba0B2 B:136-219 Alpha-lytic protease prodomain-like KH-domains Eukaryotic type KH-domain (KH-domain type I)
e2ba0C3 C:2-52 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e2ba0C1 C:53-135 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2ba0C2 C:136-219 Alpha-lytic protease prodomain-like KH-domains Eukaryotic type KH-domain (KH-domain type I)
e2ba0D2 D:10-153 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2ba0D1 D:154-242 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e2ba0E2 E:10-153 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2ba0E1 E:154-242 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e2ba0F2 F:10-153 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2ba0F1 F:154-242 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e2ba0G2 G:3-178 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2ba0G1 G:179-257 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e2ba0H2 H:3-178 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2ba0H1 H:179-257 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e2ba0I4 I:3-177 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2ba0I3 I:178-257 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2

Structural contacts of domain e2ba0A1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ba0D2 A:X,Y,Z->D:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e2ba0I4 A:X,Y,Z->I:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e2ba0D2 A:-X+1,Y-1/2,-Z->D:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol