Domain ID e2bdpA4

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: DNA_polI_exo1
UID: 000115087
Type: Automatic domain
Parent: e2hhvA4
Range: A:298-468
Ligands: SO4
PDB: 2bdp
PDB Description: PROTEIN (DNA POLYMERASE I)
UniProt: P52026
Species: Geobacillus stearothermophilus

Structure of domain e2bdpA4

Structural contacts of domain e2bdpA4 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2bdpA1 A:x,y,z->A:-X,Y-1/2,-Z+1/2 helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol
e2bdpA3 A:x,y,z->A:-X,Y-1/2,-Z+1/2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2bdpA1 A:x,y,z->A:-X+1/2,-Y+1,Z-1/2 helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol
e2bdpA2 A:x,y,z->A:-X+1/2,-Y+1,Z-1/2 "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol