ECOD: domain e2c5uA1

Domain ID e2c5uA1

A: a+b complex topology
X: Protein kinase/SAICAR synthase/ATP-grasp
H: Protein kinase/SAICAR synthase/ATP-grasp
T: ATP-grasp
F: RNA_lig_T4_1

UID:	000223711
Type:	Manual and representative domain
Range:	A:1-252
Ligands:	APC CA CL
PDB:	2c5u
PDB Description:	RNA LIGASE
UniProt:	P00971
Species:

Domains in the same chain:

Download Pymol

e2c5uA1	A:1-252	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e2c5uA2	A:253-374	T4 RNA ligase	T4 RNA ligase	T4 RNA ligase (Rnl1) C-terminal domain

Domains in the same PDB:

e2c5uA1	A:1-252	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e2c5uA2	A:253-374	T4 RNA ligase	T4 RNA ligase	T4 RNA ligase (Rnl1) C-terminal domain
e2c5uB1	B:0-252	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e2c5uB2	B:253-374	T4 RNA ligase	T4 RNA ligase	T4 RNA ligase (Rnl1) C-terminal domain

Structural contacts of domain e2c5uA1 of H-group "Protein kinase/SAICAR synthase/ATP-grasp":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2c5uA1	A:x,y,z->A:-X,Y-1/2,-Z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e2c5uA1	A:-X,Y-1/2,-Z->A:x,y,z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e2c5uB1	A:X,Y,Z->B:x,y,z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e2c5uA1	A:x,y,z->A:X,Y-1,Z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e2c5uA1	A:X,Y-1,Z->A:x,y,z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e2c5uB2	A:-X,Y-1/2,-Z->B:x,y,z	T4 RNA ligase	Interaction Interface Pymol