ECOD: domain e2c5uB2

Domain ID e2c5uB2

A: alpha arrays
X: T4 RNA ligase
H: T4 RNA ligase
T: T4 RNA ligase (Rnl1) C-terminal domain
F: T4_Rnl1_C

UID:	000290169
Type:	Automatic domain
Parent:	e2c5uA2
Range:	B:253-374
Ligands:	APC MG
PDB:	2c5u
PDB Description:	RNA LIGASE
UniProt:	P00971
Species:

Domains in the same chain:

Download Pymol

e2c5uB1	B:0-252	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e2c5uB2	B:253-374	T4 RNA ligase	T4 RNA ligase	T4 RNA ligase (Rnl1) C-terminal domain

Domains in the same PDB:

e2c5uA1	A:1-252	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e2c5uA2	A:253-374	T4 RNA ligase	T4 RNA ligase	T4 RNA ligase (Rnl1) C-terminal domain
e2c5uB1	B:0-252	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e2c5uB2	B:253-374	T4 RNA ligase	T4 RNA ligase	T4 RNA ligase (Rnl1) C-terminal domain

Structural contacts of domain e2c5uB2 of H-group "T4 RNA ligase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2c5uB2	B:x,y,z->B:-X+1,Y-1/2,-Z+1	T4 RNA ligase	Interaction Interface Pymol
e2c5uB2	B:-X+1,Y-1/2,-Z+1->B:x,y,z	T4 RNA ligase	Interaction Interface Pymol
e2c5uA2	B:X-1,Y,Z-1->A:x,y,z	T4 RNA ligase	Interaction Interface Pymol
e2c5uA1	B:x,y,z->A:-X,Y-1/2,-Z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol