Domain ID e2cfmA6

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  • A: a+b complex topology
  • X: Protein kinase/SAICAR synthase/ATP-grasp
  • H: Protein kinase/SAICAR synthase/ATP-grasp
  • T: ATP-grasp
  • F: DNA_ligase_A_M
UID: 001159089
Type: Automatic domain
Parent: e1a0iA2
Range: A:216-423
Ligands: AMP MG
PDB: 2cfm
PDB Description: THERMOSTABLE DNA LIGASE
UniProt: P56709
Hsap BLAST neighbor: P18858
Species: Pyrococcus furiosus

Structure of domain e2cfmA6

Structural contacts of domain e2cfmA6 of H-group "Protein kinase/SAICAR synthase/ATP-grasp":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2cfmA7 A:x,y,z->A:X-1,Y,Z-1 ATP-dependent DNA ligase DNA-binding domain Interaction Interface Pymol
e2cfmA8 A:x,y,z->A:-X+2,Y-1/2,-Z ATP-dependent DNA ligase DNA-binding domain Interaction Interface Pymol
e2cfmA5 A:x,y,z->A:-X+1,Y-1/2,-Z Nucleic acid-binding proteins Interaction Interface Pymol
e2cfmA8 A:x,y,z->A:-X+2,Y-1/2,-Z+1 ATP-dependent DNA ligase DNA-binding domain Interaction Interface Pymol
e2cfmA7 A:x,y,z->A:X-1,Y,Z ATP-dependent DNA ligase DNA-binding domain Interaction Interface Pymol