ECOD: domain e2cfmA8

Domain ID e2cfmA8

A: alpha bundles
X: ATP-dependent DNA ligase DNA-binding domain
H: ATP-dependent DNA ligase DNA-binding domain
T: ATP-dependent DNA ligase DNA-binding domain
F: DNA_ligase_A_N

UID:	001159091
Type:	Automatic domain
Parent:	e1x9nA2
Range:	A:1-104
PDB:	2cfm
PDB Description:	THERMOSTABLE DNA LIGASE
UniProt:	P56709
Hsap BLAST neighbor:	P18858
Species:	Pyrococcus furiosus

Domains in the same chain:

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e2cfmA8	A:1-104	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain
e2cfmA7	A:105-215	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain
e2cfmA6	A:216-423	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e2cfmA5	A:424-561	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Domains in the same PDB:

e2cfmA8	A:1-104	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain
e2cfmA7	A:105-215	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain
e2cfmA6	A:216-423	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e2cfmA5	A:424-561	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Structural contacts of domain e2cfmA8 of H-group "ATP-dependent DNA ligase DNA-binding domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2cfmA5	A:X-1,Y,Z-1->A:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e2cfmA6	A:-X+2,Y-1/2,-Z->A:x,y,z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e2cfmA6	A:-X+2,Y-1/2,-Z+1->A:x,y,z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol