ECOD: domain e2ckzB3

Domain ID e2ckzB3

A: a+b two layers
X: Dodecin subunit-like
H: Flavin-binding protein dodecin-like
T: Flavin-binding protein dodecin-like
F: SHS2_Rpb7-N

UID:	001170399
Type:	Automatic domain
Parent:	e1go3E2
Range:	B:1-78
PDB:	2ckz
PDB Description:	DNA-DIRECTED RNA POLYMERASE III 25 KD POLYPEPTIDE
UniProt:	P35718
Hsap BLAST neighbor:	Q9Y535
Species:	Saccharomyces cerevisiae

Domains in the same chain:

Download Pymol

e2ckzB3	B:1-78	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e2ckzB2	B:79-158,B:190-213	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Domains in the same PDB:

Structural contacts of domain e2ckzB3 of H-group "Flavin-binding protein dodecin-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2ckzD2	B:X,Y,Z->D:x,y,z	Flavin-binding protein dodecin-like	Interaction Interface Pymol
e2ckzC1	B:X,X-Y+1,-Z+1/6->C:x,y,z	SAM/DNA-glycosylase	Interaction Interface Pymol
e2ckzB3	B:x,y,z->B:X,X-Y+1,-Z+1/6	Flavin-binding protein dodecin-like	Interaction Interface Pymol
e2ckzB3	B:X,X-Y+1,-Z+1/6->B:x,y,z	Flavin-binding protein dodecin-like	Interaction Interface Pymol