Domain ID e2d5wA3

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: SBP_bac_5
UID: 001555320
Type: Automatic domain
Parent: e1xocA3
Range: A:1-42,A:158-296,A:554-602
PDB: 2d5w
PDB Description: PEPTIDE ABC TRANSPORTER, PEPTIDE-BINDING PROTEIN
UniProt: Q5SHU6
Species:

Structure of domain e2d5wA3

Structural contacts of domain e2d5wA3 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2d5wB1 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e2d5wB2 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e2d5wB3 A:X-1/2,-Y+1/2,-Z->B:x,y,z Oligo-peptide binding protein (OPPA) insertion domain Interaction Interface Pymol
e2d5wB2 A:X-1/2,-Y+1/2,-Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e2d5wA3 A:x,y,z->A:-X,-Y+1,Z Periplasmic binding protein-like II Interaction Interface Pymol
e2d5wA3 A:-X,-Y+1,Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e2d5wB2 A:-X,-Y+1,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol