Domain ID e2ddoB1

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Ribokinase-like
  • T: Ribokinase-like
  • F: Phos_pyr_kin
UID: 000303930
Type: Automatic domain
Parent: e1ub0A1
Range: B:5-280
Ligands: PO4
PDB: 2ddo
PDB Description: Pyridoxine kinase
UniProt: P40191
Hsap BLAST neighbor: O00764
Species: Escherichia coli

Structure of domain e2ddoB1

Structural contacts of domain e2ddoB1 of H-group "Ribokinase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ddoA1 B:x,y,z->A:X,Y,Z Ribokinase-like Interaction Interface Pymol
e2ddoB1 B:x,y,z->B:-X+1,Y-1/2,-Z+1/2 Ribokinase-like Interaction Interface Pymol
e2ddoB1 B:-X+1,Y-1/2,-Z+1/2->B:x,y,z Ribokinase-like Interaction Interface Pymol
e2ddoA1 B:X-1,Y,Z->A:x,y,z Ribokinase-like Interaction Interface Pymol
e2ddoA1 B:x,y,z->A:-X+1/2,-Y,Z-1/2 Ribokinase-like Interaction Interface Pymol
e2ddoA1 B:-X,Y-1/2,-Z+1/2->A:x,y,z Ribokinase-like Interaction Interface Pymol
e2ddoA1 B:X-1/2,-Y+1/2,-Z+1->A:x,y,z Ribokinase-like Interaction Interface Pymol
e2ddoA1 B:X-1/2,-Y-1/2,-Z+1->A:x,y,z Ribokinase-like Interaction Interface Pymol