Domain ID e2derA2

Download files:
  • A: a/b three-layered sandwiches
  • X: HUP domain-like
  • H: HUP domains
  • T: HUP domains
  • F: tRNA_Me_trans
UID: 001099071
Type: Automatic and representative domain
Range: A:5-188
Ligands: PO4 SO4
PDB: 2der
PDB Description: TRNA-SPECIFIC 2-THIOURIDYLASE MNMA
UniProt: P25745
Hsap BLAST neighbor: O75648
Species: Escherichia coli

Structure of domain e2derA2

Structural contacts of domain e2derA2 of H-group "HUP domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2derB6 A:X,Y,Z->B:x,y,z RIFT-related Interaction Interface Pymol
e2derA3 A:x,y,z->A:X,Y,Z-1 RIFT-related Interaction Interface Pymol
e2derB5 A:x,y,z->B:X,Y,Z-1 PRC-barrel domain Interaction Interface Pymol
e2derB2 A:x,y,z->B:X,Y,Z-1 HUP domains Interaction Interface Pymol