| UID: | 001386142 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1twfA10 |
| Range: | A:663-871 |
| Ligands: | DGT |
| PDB: | 2e2i |
| PDB Description: | DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT |
| UniProt: | P04050 |
| Hsap BLAST neighbor: | P24928 |
| Species: | Saccharomyces cerevisiae |
Structure of domain e2e2iA8
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e2e2iA8 of H-group "second helical domain in RNA-polymerase beta-prime subunit":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2e2iB13 | A:X,Y,Z->B:x,y,z | C-terminal domain in beta subunit of DNA dependent RNA-polymerase | Interaction Interface Pymol |
| e2e2iB11 | A:X,Y,Z->B:x,y,z | insertion domain in beta subunit of DNA dependent RNA-polymerase | Interaction Interface Pymol |
| e2e2iB8 | A:X,Y,Z->B:x,y,z | RIFT-related | Interaction Interface Pymol |
| e2e2iB10 | A:X,Y,Z->B:x,y,z | N-terminal domain in beta subunit of DNA dependent RNA-polymerase | Interaction Interface Pymol |
| e2e2iB14 | A:X,Y,Z->B:x,y,z | inserted a+b domain in yeast RNA polymerase beta subunit | Interaction Interface Pymol |
| e2e2iB12 | A:X,Y,Z->B:x,y,z | barrel domain in beta subunit of DNA dependent RNA-polymerase | Interaction Interface Pymol |
| e2e2iE1 | A:X,Y,Z->E:x,y,z | RPB5-like RNA polymerase subunit | Interaction Interface Pymol |
| e2e2iF1 | A:X,Y,Z->F:x,y,z | RPB6/omega subunit-like | Interaction Interface Pymol |
| e2e2iI2 | A:X,Y,Z->I:x,y,z | Rubredoxin-related | Interaction Interface Pymol |
| e2e2iH1 | A:X,Y,Z->H:x,y,z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e2e2iC1 | A:X,Y,Z->C:x,y,z | RBP11-like subunits of RNA polymerase | Interaction Interface Pymol |
