Domain ID e2e5lJ1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Ribosomal protein S10
  • T: Ribosomal protein S10
  • F: Ribosomal_S10
UID: 000064362
Type: Automatic domain
Parent: e2uubJ1
Range: J:3-100
PDB: 2e5l
PDB Description: 30S ribosomal protein S10
UniProt: Q5SHN7
Hsap BLAST neighbor: P60866
Species: Thermus thermophilus

Structure of domain e2e5lJ1

Domains in the same chain:

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e2e5lJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10

Domains in the same PDB:

e2e5lB1 B:7-127,B:157-228 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e2e5lC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2e5lC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2e5lD1 D:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e2e5lE1 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2e5lE2 E:74-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2e5lF1 F:1-97 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2e5lG1 G:12-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2e5lH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2e5lH2 H:67-137 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2e5lI1 I:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2e5lJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2e5lK1 K:11-125 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2e5lL1 L:5-122 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2e5lM1 M:2-123 HhH/H2TH H2TH H2TH
e2e5lN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2e5lO1 O:3-87 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2e5lP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2e5lQ1 Q:2-105 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2e5lR1 R:19-88 HTH HTH tri-helical
e2e5lS1 S:2-81 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e2e5lT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e2e5lJ1 of H-group "Ribosomal protein S10":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2e5lN1 J:X,Y,Z->N:x,y,z LIM domain-like Interaction Interface Pymol
e2e5lC2 J:x,y,z->C:X,Y,Z KH-domains Interaction Interface Pymol
e2e5lI1 J:x,y,z->I:X,Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol