ECOD: domain e2efgA3

Domain ID e2efgA3

A: a+b two layers
X: Ribosomal protein S5 domain 2-like
H: Ribosomal protein S5 domain 2-like
T: Ribosomal protein S5 domain 2-like
F: EFG_IV

UID:	000071120
Type:	Automatic domain
Parent:	e2dy1A4
Range:	A:482-599
PDB:	2efg
PDB Description:	PROTEIN (ELONGATION FACTOR G)
UniProt:	Q5SHN5
Hsap BLAST neighbor:	Q96RP9
Species:

Domain
In chain context
In PDB context

Structure of domain e2efgA3

Domains in the same chain:

Download Pymol

e2efgA4	A:7-39,A:67-282	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2efgA1	A:283-401	cradle loop barrel	RIFT-related	Alanine racemase-C
e2efgA3	A:482-599	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2efgA2	A:600-689	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like

Domains in the same PDB:

e2efgA4	A:7-39,A:67-282	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2efgA1	A:283-401	cradle loop barrel	RIFT-related	Alanine racemase-C
e2efgA3	A:482-599	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2efgA2	A:600-689	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like

Structural contacts of domain e2efgA3 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2efgA4	A:x,y,z->A:-X,Y-1/2,-Z+1/2	P-loop domains-related	Interaction Interface Pymol
e2efgA4	A:-X+1/2,-Y,Z-1/2->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2efgA1	A:X-1,Y,Z->A:x,y,z	RIFT-related	Interaction Interface Pymol