ECOD: domain e2efgA4

Domain ID e2efgA4

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: GTP_EFTU

UID:	000101597
Type:	Automatic domain
Parent:	e2c78A3
Range:	A:7-39,A:67-282
Ligands:	GDP
PDB:	2efg
PDB Description:	PROTEIN (ELONGATION FACTOR G)
UniProt:	Q5SHN5
Hsap BLAST neighbor:	Q96RP9
Species:

Domain
In chain context
In PDB context

Structure of domain e2efgA4

Domains in the same chain:

Download Pymol

e2efgA4	A:7-39,A:67-282	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2efgA1	A:283-401	cradle loop barrel	RIFT-related	Alanine racemase-C
e2efgA3	A:482-599	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2efgA2	A:600-689	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like

Domains in the same PDB:

e2efgA4	A:7-39,A:67-282	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2efgA1	A:283-401	cradle loop barrel	RIFT-related	Alanine racemase-C
e2efgA3	A:482-599	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2efgA2	A:600-689	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like

Structural contacts of domain e2efgA4 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2efgA3	A:-X,Y-1/2,-Z+1/2->A:x,y,z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e2efgA3	A:x,y,z->A:-X+1/2,-Y,Z-1/2	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e2efgA1	A:x,y,z->A:-X-1/2,-Y,Z-1/2	RIFT-related	Interaction Interface Pymol