Domain ID e2fdkA1

Download files:
  • A: beta sandwiches
  • X: jelly-roll
  • H: Double-stranded beta-helix
  • T: Double-stranded beta-helix
  • F: 2OG-FeII_Oxy_2
UID: 000032139
Type: Automatic domain
Parent: e2fdiA1
Range: A:16-214
Ligands: AKG FE2 SIN
PDB: 2fdk
PDB Description: Alkylated DNA repair protein alkB
UniProt: P05050
Hsap BLAST neighbor: Q13686
Species:

Structure of domain e2fdkA1

Structural contacts of domain e2fdkA1 of H-group "Double-stranded beta-helix":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2fdkA1 A:x,y,z->A:-Y+1,X,Z-1/4 Double-stranded beta-helix Interaction Interface Pymol
e2fdkA1 A:-Y+1,X,Z-1/4->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e2fdkA1 A:x,y,z->A:-Y,X,Z-1/4 Double-stranded beta-helix Interaction Interface Pymol
e2fdkA1 A:-Y,X,Z-1/4->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e2fdkA1 A:x,y,z->A:X-1,Y,Z Double-stranded beta-helix Interaction Interface Pymol
e2fdkA1 A:X-1,Y,Z->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e2fdkA1 A:x,y,z->A:X,Y-1,Z Double-stranded beta-helix Interaction Interface Pymol
e2fdkA1 A:X,Y-1,Z->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol