ECOD: domain e2gaiA4

Domain ID e2gaiA4

A: alpha arrays
X: HTH
H: HTH
T: winged
F: Topoisom_bac

UID:	001721095
Type:	Automatic domain
Parent:	e1mw9X2
Range:	A:129-186,A:441-549
PDB:	2gai
PDB Description:	DNA TOPOISOMERASE I
UniProt:	P46799
Species:

Domain
In chain context
In PDB context

Structure of domain e2gaiA4

Domains in the same chain:

Download Pymol

e2gaiA2	A:7-128	HAD domain-like	HAD domain-related	Toprim domain
e2gaiA4	A:129-186,A:441-549	HTH	HTH	winged
e2gaiA3	A:187-241,A:374-440	LigT-like	Prokaryotic type I DNA topoisomerase beta-barrel domain	Prokaryotic type I DNA topoisomerase beta-barrel domain
e2gaiA1	A:242-373	HTH	HTH	winged
e2gaiA5	A:550-601	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e2gaiA2	A:7-128	HAD domain-like	HAD domain-related	Toprim domain
e2gaiA4	A:129-186,A:441-549	HTH	HTH	winged
e2gaiA3	A:187-241,A:374-440	LigT-like	Prokaryotic type I DNA topoisomerase beta-barrel domain	Prokaryotic type I DNA topoisomerase beta-barrel domain
e2gaiA1	A:242-373	HTH	HTH	winged
e2gaiA5	A:550-601	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e2gaiB3	B:7-128	HAD domain-like	HAD domain-related	Toprim domain
e2gaiB2	B:129-186,B:441-549	HTH	HTH	winged
e2gaiB4	B:187-241,B:374-440	LigT-like	Prokaryotic type I DNA topoisomerase beta-barrel domain	Prokaryotic type I DNA topoisomerase beta-barrel domain
e2gaiB1	B:242-373	HTH	HTH	winged
e2gaiB5	B:550-601	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Structural contacts of domain e2gaiA4 of H-group "HTH":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2gaiB4	A:X,Y,Z->B:x,y,z	Prokaryotic type I DNA topoisomerase beta-barrel domain	Interaction Interface Pymol
e2gaiA1	A:x,y,z->A:X-1,Y,Z	HTH	Interaction Interface Pymol