| UID: | 001720153 |
|---|---|
| Type: | Manual and representative domain |
| Range: | B:550-601 |
| PDB: | 2gai |
| PDB Description: | DNA TOPOISOMERASE I |
| UniProt: | P46799 |
| Species: |
Structure of domain e2gaiB5
Domains in the same chain:
| e2gaiB3 | B:7-128 | HAD domain-like | HAD domain-related | Toprim domain |
| e2gaiB2 | B:129-186,B:441-549 | HTH | HTH | winged |
| e2gaiB4 | B:187-241,B:374-440 | LigT-like | Prokaryotic type I DNA topoisomerase beta-barrel domain | Prokaryotic type I DNA topoisomerase beta-barrel domain |
| e2gaiB1 | B:242-373 | HTH | HTH | winged |
| e2gaiB5 | B:550-601 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
Domains in the same PDB:
| e2gaiA2 | A:7-128 | HAD domain-like | HAD domain-related | Toprim domain |
| e2gaiA4 | A:129-186,A:441-549 | HTH | HTH | winged |
| e2gaiA3 | A:187-241,A:374-440 | LigT-like | Prokaryotic type I DNA topoisomerase beta-barrel domain | Prokaryotic type I DNA topoisomerase beta-barrel domain |
| e2gaiA1 | A:242-373 | HTH | HTH | winged |
| e2gaiA5 | A:550-601 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
| e2gaiB3 | B:7-128 | HAD domain-like | HAD domain-related | Toprim domain |
| e2gaiB2 | B:129-186,B:441-549 | HTH | HTH | winged |
| e2gaiB4 | B:187-241,B:374-440 | LigT-like | Prokaryotic type I DNA topoisomerase beta-barrel domain | Prokaryotic type I DNA topoisomerase beta-barrel domain |
| e2gaiB1 | B:242-373 | HTH | HTH | winged |
| e2gaiB5 | B:550-601 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
Structural contacts of domain e2gaiB5 of H-group "Rubredoxin-related":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2gaiA2 | B:x,y,z->A:X-1,Y,Z+1 | HAD domain-related | Interaction Interface Pymol |
| e2gaiA1 | B:x,y,z->A:X-1,Y,Z+1 | HTH | Interaction Interface Pymol |
