ECOD: domain e2gajA2

Domain ID e2gajA2

A: alpha arrays
X: HTH
H: HTH
T: winged
F: Topoisom_bac

UID:	001721097
Type:	Automatic domain
Parent:	e1mw9X2
Range:	A:129-186,A:441-549
PDB:	2gaj
PDB Description:	DNA TOPOISOMERASE I
UniProt:	P46799
Species:

Domain
In chain context
In PDB context

Structure of domain e2gajA2

Domains in the same chain:

Download Pymol

e2gajA3	A:7-128	HAD domain-like	HAD domain-related	Toprim domain
e2gajA2	A:129-186,A:441-549	HTH	HTH	winged
e2gajA4	A:187-241,A:374-440	LigT-like	Prokaryotic type I DNA topoisomerase beta-barrel domain	Prokaryotic type I DNA topoisomerase beta-barrel domain
e2gajA1	A:242-373	HTH	HTH	winged
e2gajA5	A:550-601	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e2gajA3	A:7-128	HAD domain-like	HAD domain-related	Toprim domain
e2gajA2	A:129-186,A:441-549	HTH	HTH	winged
e2gajA4	A:187-241,A:374-440	LigT-like	Prokaryotic type I DNA topoisomerase beta-barrel domain	Prokaryotic type I DNA topoisomerase beta-barrel domain
e2gajA1	A:242-373	HTH	HTH	winged
e2gajA5	A:550-601	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e2gajB2	B:7-128	HAD domain-like	HAD domain-related	Toprim domain
e2gajB3	B:129-186,B:441-549	HTH	HTH	winged
e2gajB1	B:187-241,B:374-440	LigT-like	Prokaryotic type I DNA topoisomerase beta-barrel domain	Prokaryotic type I DNA topoisomerase beta-barrel domain
e2gajB4	B:242-373	HTH	HTH	winged
e2gajB5	B:550-601	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Structural contacts of domain e2gajA2 of H-group "HTH":

Sorry, the images are being generated.

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2gajB1	A:X,Y,Z->B:x,y,z	Prokaryotic type I DNA topoisomerase beta-barrel domain	Interaction Interface Pymol
e2gajA1	A:x,y,z->A:X-1,Y,Z	HTH	Interaction Interface Pymol