| UID: | 001618752 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1mw9X1 |
| Range: | B:187-241,B:374-440 |
| PDB: | 2gaj |
| PDB Description: | DNA TOPOISOMERASE I |
| UniProt: | P46799 |
| Species: |
Structure of domain e2gajB1
Domains in the same chain:
| e2gajB2 | B:7-128 | HAD domain-like | HAD domain-related | Toprim domain |
| e2gajB3 | B:129-186,B:441-549 | HTH | HTH | winged |
| e2gajB1 | B:187-241,B:374-440 | LigT-like | Prokaryotic type I DNA topoisomerase beta-barrel domain | Prokaryotic type I DNA topoisomerase beta-barrel domain |
| e2gajB4 | B:242-373 | HTH | HTH | winged |
| e2gajB5 | B:550-601 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
Domains in the same PDB:
| e2gajA3 | A:7-128 | HAD domain-like | HAD domain-related | Toprim domain |
| e2gajA2 | A:129-186,A:441-549 | HTH | HTH | winged |
| e2gajA4 | A:187-241,A:374-440 | LigT-like | Prokaryotic type I DNA topoisomerase beta-barrel domain | Prokaryotic type I DNA topoisomerase beta-barrel domain |
| e2gajA1 | A:242-373 | HTH | HTH | winged |
| e2gajA5 | A:550-601 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
| e2gajB2 | B:7-128 | HAD domain-like | HAD domain-related | Toprim domain |
| e2gajB3 | B:129-186,B:441-549 | HTH | HTH | winged |
| e2gajB1 | B:187-241,B:374-440 | LigT-like | Prokaryotic type I DNA topoisomerase beta-barrel domain | Prokaryotic type I DNA topoisomerase beta-barrel domain |
| e2gajB4 | B:242-373 | HTH | HTH | winged |
| e2gajB5 | B:550-601 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
Structural contacts of domain e2gajB1 of H-group "Prokaryotic type I DNA topoisomerase beta-barrel domain":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2gajA4 | B:x,y,z->A:X,Y,Z | Prokaryotic type I DNA topoisomerase beta-barrel domain | Interaction Interface Pymol |
| e2gajA2 | B:x,y,z->A:X,Y,Z | HTH | Interaction Interface Pymol |
| e2gajA4 | B:x,y,z->A:X-1,Y,Z | Prokaryotic type I DNA topoisomerase beta-barrel domain | Interaction Interface Pymol |
| e2gajA1 | B:x,y,z->A:X-1,Y,Z | HTH | Interaction Interface Pymol |
