ECOD: domain e2gjwA2

Domain ID e2gjwA2

A: a+b two layers
X: Homing endonucleases-like
H: tRNA-intron endonuclease N-terminal domain-like
T: tRNA-intron endonuclease N-terminal domain-like
F: Unmapped domains

UID:	000067912
Type:	Automatic domain
Parent:	e1r0vA1
Range:	A:6-63
PDB:	2gjw
PDB Description:	tRNA-splicing endonuclease
UniProt:	O29362
Species:	Archaeoglobus fulgidus

Domain
In chain context
In PDB context

Structure of domain e2gjwA2

Domains in the same chain:

Download Pymol

e2gjwA2	A:6-63	Homing endonucleases-like	tRNA-intron endonuclease N-terminal domain-like	tRNA-intron endonuclease N-terminal domain-like
e2gjwA3	A:65-142	Restriction endonuclease-like	tRNA-intron endonuclease catalytic domain-like	tRNA-intron endonuclease catalytic domain-like
e2gjwA1	A:143-217	Homing endonucleases-like	tRNA-intron endonuclease N-terminal domain-like	tRNA-intron endonuclease N-terminal domain-like
e2gjwA4	A:218-308	Restriction endonuclease-like	tRNA-intron endonuclease catalytic domain-like	tRNA-intron endonuclease catalytic domain-like

Domains in the same PDB:

Structural contacts of domain e2gjwA2 of H-group "tRNA-intron endonuclease N-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2gjwB1	A:X,Y,Z->B:x,y,z	tRNA-intron endonuclease N-terminal domain-like	Interaction Interface Pymol
e2gjwC2	A:X,Y,Z->C:x,y,z	tRNA-intron endonuclease N-terminal domain-like	Interaction Interface Pymol
e2gjwD1	A:X,Y,Z->D:x,y,z	tRNA-intron endonuclease N-terminal domain-like	Interaction Interface Pymol
e2gjwC1	A:-X+2,Y-1/2,-Z->C:x,y,z	tRNA-intron endonuclease N-terminal domain-like	Interaction Interface Pymol
e2gjwD2	A:-X+2,Y-1/2,-Z->D:x,y,z	tRNA-intron endonuclease N-terminal domain-like	Interaction Interface Pymol