ECOD: domain e2gmiA1

Domain ID e2gmiA1

A: a+b two layers
X: UBC-like
H: UBC-like
T: UBC-like
F: UQ_con

UID:	000075063
Type:	Automatic domain
Parent:	e1jatB1
Range:	A:3-149
PDB:	2gmi
PDB Description:	Ubiquitin-conjugating enzyme E2 13
UniProt:	P52490
Hsap BLAST neighbor:	P61088
Species:	Saccharomyces cerevisiae

Domains in the same chain:

Download Pymol

e2gmiA1	A:3-149	UBC-like	UBC-like	UBC-like

Domains in the same PDB:

e2gmiA1	A:3-149	UBC-like	UBC-like	UBC-like
e2gmiB1	B:3-137	UBC-like	UBC-like	UBC-like
e2gmiC1	C:501-576	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Structural contacts of domain e2gmiA1 of H-group "UBC-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2gmiB1	A:X,Y,Z->B:x,y,z	UBC-like	Interaction Interface Pymol
e2gmiC1	A:x,y,z->C:X-1/2,-Y+1/2,-Z	Ubiquitin-related	Interaction Interface Pymol
e2gmiB1	A:-X+1,Y-1/2,-Z+1/2->B:x,y,z	UBC-like	Interaction Interface Pymol
e2gmiB1	A:-X,Y-1/2,-Z+1/2->B:x,y,z	UBC-like	Interaction Interface Pymol
e2gmiC1	A:X,Y,Z->C:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e2gmiB1	A:x,y,z->B:-X+1/2,-Y+1,Z-1/2	UBC-like	Interaction Interface Pymol
e2gmiC1	A:X-1/2,-Y+1/2,-Z->C:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e2gmiB1	A:X-1,Y,Z->B:x,y,z	UBC-like	Interaction Interface Pymol