ECOD: domain e2gmiB1

Domain ID e2gmiB1

A: a+b two layers
X: UBC-like
H: UBC-like
T: UBC-like
F: UQ_con

UID:	000074978
Type:	Automatic domain
Parent:	e1jatB1
Range:	B:3-137
PDB:	2gmi
PDB Description:	Ubiquitin-conjugating enzyme variant MMS2
UniProt:	P53152
Hsap BLAST neighbor:	Q15819
Species:	Saccharomyces cerevisiae

Domains in the same chain:

Download Pymol

e2gmiB1	B:3-137	UBC-like	UBC-like	UBC-like

Domains in the same PDB:

e2gmiA1	A:3-149	UBC-like	UBC-like	UBC-like
e2gmiB1	B:3-137	UBC-like	UBC-like	UBC-like
e2gmiC1	C:501-576	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Structural contacts of domain e2gmiB1 of H-group "UBC-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2gmiC1	B:x,y,z->C:X-1/2,-Y+1/2,-Z	Ubiquitin-related	Interaction Interface Pymol
e2gmiA1	B:x,y,z->A:X,Y,Z	UBC-like	Interaction Interface Pymol
e2gmiA1	B:x,y,z->A:-X+1,Y-1/2,-Z+1/2	UBC-like	Interaction Interface Pymol
e2gmiA1	B:x,y,z->A:-X,Y-1/2,-Z+1/2	UBC-like	Interaction Interface Pymol
e2gmiA1	B:-X+1/2,-Y+1,Z-1/2->A:x,y,z	UBC-like	Interaction Interface Pymol
e2gmiC1	B:X,Y,Z->C:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e2gmiA1	B:x,y,z->A:X-1,Y,Z	UBC-like	Interaction Interface Pymol
e2gmiB1	B:x,y,z->B:-X,Y-1/2,-Z+1/2	UBC-like	Interaction Interface Pymol
e2gmiB1	B:-X,Y-1/2,-Z+1/2->B:x,y,z	UBC-like	Interaction Interface Pymol