Domain ID e2gmsA1

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  • A: a/b three-layered sandwiches
  • X: PLP-dependent transferases
  • H: PLP-dependent transferases
  • T: PLP-dependent transferases
  • F: DegT_DnrJ_EryC1
UID: 001667836
Type: Automatic domain
Parent: e1mdoA2
Range: A:-1-266
Ligands: P0P
PDB: 2gms
PDB Description: Putative pyridoxamine 5-phosphate-dependent dehydrase, Wbdk
UniProt: Q9F118
Species: Escherichia coli

Structure of domain e2gmsA1

Structural contacts of domain e2gmsA1 of H-group "PLP-dependent transferases":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2gmsB2 A:X,Y,Z->B:x,y,z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e2gmsB1 A:X,Y,Z->B:x,y,z PLP-dependent transferases Interaction Interface Pymol
e2gmsB1 A:x,y,z->B:X-1/2,-Y+1/2,-Z PLP-dependent transferases Interaction Interface Pymol
e2gmsB2 A:x,y,z->B:X-1/2,-Y+1/2,-Z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e2gmsB2 A:x,y,z->B:-X,Y-1/2,-Z+1/2 C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e2gmsB1 A:x,y,z->B:-X,Y-1/2,-Z+1/2 PLP-dependent transferases Interaction Interface Pymol
e2gmsA2 A:X-1/2,-Y-1/2,-Z->A:x,y,z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol