ECOD: domain e2gmsB1

Domain ID e2gmsB1

A: a/b three-layered sandwiches
X: PLP-dependent transferases
H: PLP-dependent transferases
T: PLP-dependent transferases
F: DegT_DnrJ_EryC1

UID:	001667838
Type:	Automatic domain
Parent:	e1mdoA2
Range:	B:0-266
Ligands:	P0P
PDB:	2gms
PDB Description:	Putative pyridoxamine 5-phosphate-dependent dehydrase, Wbdk
UniProt:	Q9F118
Species:	Escherichia coli

Domains in the same chain:

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e2gmsB1	B:0-266	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e2gmsB2	B:267-388	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases

Domains in the same PDB:

e2gmsA1	A:-1-266	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e2gmsA2	A:267-388	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases
e2gmsB1	B:0-266	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e2gmsB2	B:267-388	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases

Structural contacts of domain e2gmsB1 of H-group "PLP-dependent transferases":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2gmsA1	B:x,y,z->A:X,Y,Z	PLP-dependent transferases	Interaction Interface Pymol
e2gmsA2	B:x,y,z->A:X,Y,Z	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol
e2gmsA1	B:X-1/2,-Y+1/2,-Z->A:x,y,z	PLP-dependent transferases	Interaction Interface Pymol
e2gmsA2	B:X-1,Y,Z->A:x,y,z	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol
e2gmsA1	B:-X,Y-1/2,-Z+1/2->A:x,y,z	PLP-dependent transferases	Interaction Interface Pymol