Domain ID e2gnnB1

Download files:
  • A: few secondary structure elements
  • X: Cystine-knot cytokines
  • H: Cystine-knot cytokines
  • T: Cystine-knot cytokines
  • F: PDGF
UID: 000299568
Type: Automatic domain
Parent: e1pdgA1
Range: B:13-107
Ligands: BEN GOL NAG TRS
PDB: 2gnn
PDB Description: Vascular endothelial growth factor homolog
UniProt: P52584
Hsap BLAST neighbor: P15692
Species:

Structure of domain e2gnnB1

Structural contacts of domain e2gnnB1 of H-group "Cystine-knot cytokines":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2gnnA1 B:x,y,z->A:X,Y,Z Cystine-knot cytokines Interaction Interface Pymol
e2gnnC1 B:-X+1,Y,-Z->C:x,y,z Cystine-knot cytokines Interaction Interface Pymol
e2gnnC1 B:X,Y,Z->C:x,y,z Cystine-knot cytokines Interaction Interface Pymol
e2gnnB1 B:x,y,z->B:-X,Y,-Z Cystine-knot cytokines Interaction Interface Pymol
e2gnnB1 B:-X,Y,-Z->B:x,y,z Cystine-knot cytokines Interaction Interface Pymol
e2gnnD1 B:X,Y,Z->D:x,y,z Cystine-knot cytokines Interaction Interface Pymol
e2gnnA1 B:x,y,z->A:-X,Y,-Z Cystine-knot cytokines Interaction Interface Pymol
e2gnnB1 B:x,y,z->B:-X+1,Y,-Z Cystine-knot cytokines Interaction Interface Pymol
e2gnnB1 B:-X+1,Y,-Z->B:x,y,z Cystine-knot cytokines Interaction Interface Pymol