Domain ID e2h88B1

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  • A: alpha arrays
  • X: alpha-helical ferredoxin-like
  • H: alpha-helical ferredoxin
  • T: alpha-helical ferredoxin
  • F: Fer4_17
UID: 000301679
Type: Automatic domain
Parent: e1nekB1
Range: B:115-246
Ligands: BHG F3S GOL HEM K SF4 UNL
PDB: 2h88
PDB Description: Succinate dehydrogenase Ip subunit
UniProt: Q9YHT2
Hsap BLAST neighbor: P21912
Species: Gallus gallus

Structure of domain e2h88B1

Domains in the same chain:

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e2h88B2 B:8-114 beta-Grasp Ubiquitin-related Ubiquitin-like
e2h88B1 B:115-246 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin

Domains in the same PDB:

e2h88A4 A:10-246,A:376-461 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e2h88A1 A:247-375 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e2h88A5 A:462-621 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
e2h88B2 B:8-114 beta-Grasp Ubiquitin-related Ubiquitin-like
e2h88B1 B:115-246 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin
e2h88C1 C:2-140 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e2h88D1 D:3-103 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e2h88N1 N:10-246,N:376-461 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e2h88N2 N:247-375 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e2h88N3 N:462-621 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
e2h88O2 O:8-114 beta-Grasp Ubiquitin-related Ubiquitin-like
e2h88O1 O:115-246 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin
e2h88P1 P:2-140 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e2h88Q1 Q:3-103 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits

Structural contacts of domain e2h88B1 of H-group "alpha-helical ferredoxin":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2h88A4 B:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e2h88C1 B:X,Y,Z->C:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e2h88D1 B:X,Y,Z->D:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol