Domain ID e2hgpN1

Download files:
  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Ribosomal_S11
UID: 000114754
Type: Automatic domain
Parent: e2uubK1
Range: N:11-129
PDB: 2hgp
PDB Description:
Hsap BLAST neighbor: P82912
Species:

Structure of domain e2hgpN1

Domains in the same chain:

Download Pymol

e2hgpN1 N:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e2hgpF2 F:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2hgpF1 F:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2hgpH1 H:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2hgpH2 H:74-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2hgpI1 I:1-97 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2hgpJ1 J:12-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2hgpK1 K:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2hgpK2 K:67-137 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2hgpM1 M:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2hgpN1 N:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2hgpO1 O:5-122 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2hgpQ1 Q:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2hgpR1 R:3-87 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2hgpS1 S:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2hgpU1 U:19-88 HTH HTH tri-helical
e2hgpW1 W:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e2hgpN1 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2hgpU1 N:X,Y,Z->U:x,y,z HTH Interaction Interface Pymol
e2hgpJ1 N:x,y,z->J:X,Y,Z Ribosomal protein S7 Interaction Interface Pymol