ECOD: domain e2ipcD3

Domain ID e2ipcD3

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: SecA_DEAD

UID:	000957917
Type:	Automatic domain
Parent:	e1tf5A3
Range:	D:1-223,D:357-404
PDB:	2ipc
PDB Description:	Preprotein translocase SecA subunit
UniProt:	Q5SIW3
Species:

Domains in the same chain:

Download Pymol

e2ipcD3	D:1-223,D:357-404	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2ipcD1	D:224-356	Pre-protein crosslinking domain of SecA	Pre-protein crosslinking domain of SecA	Pre-protein crosslinking domain of SecA
e2ipcD4	D:405-723	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2ipcD2	D:724-934	Helical scaffold and wing domains of SecA	Helical scaffold and wing domains of SecA	Helical scaffold and wing domains of SecA

Domains in the same PDB:

e2ipcA1	A:1-228,A:362-409	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2ipcA4	A:229-361	Pre-protein crosslinking domain of SecA	Pre-protein crosslinking domain of SecA	Pre-protein crosslinking domain of SecA
e2ipcA3	A:410-728	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2ipcA2	A:729-939	Helical scaffold and wing domains of SecA	Helical scaffold and wing domains of SecA	Helical scaffold and wing domains of SecA
e2ipcB3	B:1-223,B:357-404	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2ipcB1	B:224-356	Pre-protein crosslinking domain of SecA	Pre-protein crosslinking domain of SecA	Pre-protein crosslinking domain of SecA
e2ipcB4	B:405-723	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2ipcB2	B:724-934	Helical scaffold and wing domains of SecA	Helical scaffold and wing domains of SecA	Helical scaffold and wing domains of SecA
e2ipcC3	C:1-228,C:362-409	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2ipcC1	C:229-361	Pre-protein crosslinking domain of SecA	Pre-protein crosslinking domain of SecA	Pre-protein crosslinking domain of SecA
e2ipcC4	C:410-728	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2ipcC2	C:729-939	Helical scaffold and wing domains of SecA	Helical scaffold and wing domains of SecA	Helical scaffold and wing domains of SecA
e2ipcD3	D:1-223,D:357-404	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2ipcD1	D:224-356	Pre-protein crosslinking domain of SecA	Pre-protein crosslinking domain of SecA	Pre-protein crosslinking domain of SecA
e2ipcD4	D:405-723	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2ipcD2	D:724-934	Helical scaffold and wing domains of SecA	Helical scaffold and wing domains of SecA	Helical scaffold and wing domains of SecA

Structural contacts of domain e2ipcD3 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2ipcC4	D:x,y,z->C:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e2ipcD4	D:-Y+1,X-Y+1,Z-1/3->D:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2ipcC4	D:-Y+1,X-Y+1,Z-1/3->C:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2ipcC3	D:-Y+1,X-Y+1,Z-1/3->C:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2ipcA3	D:x,y,z->A:-Y+1,X-Y+1,Z-1/3	P-loop domains-related	Interaction Interface Pymol
e2ipcB3	D:x,y,z->B:-Y+1,X-Y+1,Z-1/3	P-loop domains-related	Interaction Interface Pymol
e2ipcB4	D:x,y,z->B:-Y+1,X-Y+1,Z-1/3	P-loop domains-related	Interaction Interface Pymol