Domain ID e2j01N1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L13/L15p/L18e/L32e
  • H: Ribosomal protein L13 and L16-A
  • T: Ribosomal protein L13 and L16-A
  • F: Ribosomal_L13
UID: 000118752
Type: Automatic domain
Parent: e4v19N1
Range: N:1-138
PDB: 2j01
PDB Description:
Hsap BLAST neighbor: Q9BYD1
Species:

Structure of domain e2j01N1

Domains in the same chain:

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e2j01N1 N:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A

Domains in the same PDB:

e2j0101 0:1-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e2j0111 1:8-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e2j0121 2:12-62 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e2j0131 3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e2j0141 4:1-50 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e2j0151 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2j0161 6:9-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2j0171 7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e2j0181 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e2j01C6 C:18-66,C:159-224 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e2j01C5 C:67-158 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e2j01D2 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2j01D3 D:127-273 SH3 SH3 SH3
e2j01F1 F:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e2j01G1 G:4-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e2j01H1 H:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2j01H2 H:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2j01I2 I:1-52 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e2j01I1 I:56-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e2j01N1 N:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e2j01O1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e2j01P1 P:5-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e2j01R1 R:14-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e2j01U1 U:3-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e2j01V1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e2j01W1 W:2-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e2j01X1 X:3-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e2j01Y2 Y:2-102 SH3 SH3 SH3
e2j01Z1 Z:3-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e2j01Z2 Z:93-179 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e2j01N1 of H-group "Ribosomal protein L13 and L16-A":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2j01U1 N:X,Y,Z->U:x,y,z Ribosomal protein L20 Interaction Interface Pymol
e2j01V1 N:X,Y,Z->V:x,y,z Ribosomal protein L21p Interaction Interface Pymol
e2j01V1 N:x,y,z->E:X,Y,Z Ribosomal protein L21p Interaction Interface Pymol