ECOD: domain e2j0qA1

Domain ID e2j0qA1

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: Helicase_C

UID:	000102627
Type:	Automatic domain
Parent:	e1hv8A2
Range:	A:251-411
Ligands:	ANP MG
PDB:	2j0q
PDB Description:	ATP-DEPENDENT RNA HELICASE DDX48
UniProt:	P38919
Hsap BLAST neighbor:	P38919
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2j0qA1

Domains in the same chain:

Download Pymol

e2j0qA2	A:24-241	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2j0qA1	A:251-411	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e2j0qA2	A:24-241	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2j0qA1	A:251-411	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2j0qB2	B:24-241	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2j0qB1	B:251-411	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2j0qC1	C:4-143	Mago nashi protein	Mago nashi protein	Mago nashi protein
e2j0qD1	D:66-153	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e2j0qF1	F:4-143	Mago nashi protein	Mago nashi protein	Mago nashi protein
e2j0qG1	G:66-153	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Structural contacts of domain e2j0qA1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2j0qC1	A:X,Y,Z->C:x,y,z	Mago nashi protein	Interaction Interface Pymol
e2j0qD1	A:X,Y,Z->D:x,y,z	RNA-binding domain, RBD	Interaction Interface Pymol