ECOD: domain e2j0qG1

Domain ID e2j0qG1

A: a+b two layers
X: Alpha-beta plaits
H: RNA-binding domain, RBD
T: RNA-binding domain, RBD
F: RRM_1

UID:	000063958
Type:	Automatic domain
Parent:	e1h2vZ1
Range:	G:66-153
PDB:	2j0q
PDB Description:	RNA-BINDING PROTEIN 8A
UniProt:	Q9Y5S9
Hsap BLAST neighbor:	Q9Y5S9
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2j0qG1

Domains in the same chain:

Download Pymol

e2j0qG1	G:66-153	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Domains in the same PDB:

e2j0qA2	A:24-241	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2j0qA1	A:251-411	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2j0qB2	B:24-241	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2j0qB1	B:251-411	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2j0qC1	C:4-143	Mago nashi protein	Mago nashi protein	Mago nashi protein
e2j0qD1	D:66-153	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e2j0qF1	F:4-143	Mago nashi protein	Mago nashi protein	Mago nashi protein
e2j0qG1	G:66-153	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Structural contacts of domain e2j0qG1 of H-group "RNA-binding domain, RBD":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2j0qF1	G:x,y,z->F:X,Y,Z	Mago nashi protein	Interaction Interface Pymol
e2j0qA2	G:x,y,z->A:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e2j0qB1	G:x,y,z->B:X,Y,Z	P-loop domains-related	Interaction Interface Pymol