ECOD: domain e2npfB1

Domain ID e2npfB1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: GTP_EFTU_D2

UID:	000021648
Type:	Automatic domain
Parent:	e1n0uA1
Range:	B:344-481
PDB:	2npf
PDB Description:	Elongation factor 2
UniProt:	P32324
Hsap BLAST neighbor:	P13639
Species:	Saccharomyces cerevisiae

Domain
In chain context
In PDB context

Structure of domain e2npfB1

Domains in the same chain:

Download Pymol

Domains in the same PDB:

e2npfA5	A:3-343	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2npfA1	A:344-481	cradle loop barrel	RIFT-related	Alanine racemase-C
e2npfA2	A:482-560	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e2npfA4	A:561-725	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2npfA3	A:726-842	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e2npfB5	B:3-343	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2npfB1	B:344-481	cradle loop barrel	RIFT-related	Alanine racemase-C
e2npfB2	B:482-560	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e2npfB4	B:561-725	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2npfB3	B:726-842	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like

Structural contacts of domain e2npfB1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2npfA3	B:x,y,z->A:X,Y,Z	EF-G C-terminal domain-like	Interaction Interface Pymol
e2npfA4	B:x,y,z->A:X,Y,Z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol