ECOD: domain e2ntiA1

Domain ID e2ntiA1

A: a+b two layers
X: DNA clamp
H: DNA clamp
T: DNA clamp
F: PCNA_N

UID:	000333258
Type:	Automatic domain
Parent:	e1iz5A1
Range:	A:1-118
Ligands:	BR
PDB:	2nti
PDB Description:	DNA polymerase sliding clamp B
UniProt:	P57766
Species:

Domain
In chain context
In PDB context

Structure of domain e2ntiA1

Domains in the same chain:

Download Pymol

e2ntiA1	A:1-118	DNA clamp	DNA clamp	DNA clamp
e2ntiA2	A:119-248	DNA clamp	DNA clamp	DNA clamp

Domains in the same PDB:

e2ntiA1	A:1-118	DNA clamp	DNA clamp	DNA clamp
e2ntiA2	A:119-248	DNA clamp	DNA clamp	DNA clamp
e2ntiB1	B:1-115	DNA clamp	DNA clamp	DNA clamp
e2ntiB2	B:116-245	DNA clamp	DNA clamp	DNA clamp
e2ntiC1	C:1-121	DNA clamp	DNA clamp	DNA clamp
e2ntiC2	C:122-244	DNA clamp	DNA clamp	DNA clamp
e2ntiD1	D:1-118	DNA clamp	DNA clamp	DNA clamp
e2ntiD2	D:119-249	DNA clamp	DNA clamp	DNA clamp
e2ntiE1	E:1-115	DNA clamp	DNA clamp	DNA clamp
e2ntiE2	E:116-246	DNA clamp	DNA clamp	DNA clamp
e2ntiF1	F:1-121	DNA clamp	DNA clamp	DNA clamp
e2ntiF2	F:122-244	DNA clamp	DNA clamp	DNA clamp
e2ntiG1	G:1-118	DNA clamp	DNA clamp	DNA clamp
e2ntiG2	G:119-249	DNA clamp	DNA clamp	DNA clamp
e2ntiH1	H:1-115	DNA clamp	DNA clamp	DNA clamp
e2ntiH2	H:116-246	DNA clamp	DNA clamp	DNA clamp
e2ntiI1	I:1-121	DNA clamp	DNA clamp	DNA clamp
e2ntiI2	I:125-244	DNA clamp	DNA clamp	DNA clamp

Structural contacts of domain e2ntiA1 of H-group "DNA clamp":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2ntiC2	A:X,Y,Z->C:x,y,z	DNA clamp	Interaction Interface Pymol
e2ntiD2	A:X,Y,Z->D:x,y,z	DNA clamp	Interaction Interface Pymol
e2ntiD1	A:X,Y,Z->D:x,y,z	DNA clamp	Interaction Interface Pymol
e2ntiF1	A:x,y,z->F:X,Y,Z-1	DNA clamp	Interaction Interface Pymol
e2ntiG2	A:x,y,z->G:X,Y,Z-1	DNA clamp	Interaction Interface Pymol