ECOD: domain e2nupC1

Domain ID e2nupC1

A: a+b three layers
X: Profilin-like
H: profilin-like
T: profilin-like
F: Longin

UID:	001394213
Type:	Automatic domain
Parent:	e1ifqA1
Range:	C:1-157
PDB:	2nup
PDB Description:	Vesicle-trafficking protein SEC22b
UniProt:	O75396
Hsap BLAST neighbor:	O75396
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2nupC1

Domains in the same chain:

Download Pymol

e2nupC1	C:1-157	Profilin-like	profilin-like	profilin-like

Domains in the same PDB:

e2nupA4	A:3-50,A:394-517	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e2nupA5	A:51-122	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e2nupA1	A:123-393	HAD domain-like	HAD domain-related	vWA-like
e2nupA2	A:518-620	ERP29 C domain-like	Helical domain of Sec23/24	Helical domain of Sec23/24
e2nupA3	A:621-723,A:746-764	Gelsolin-like	Gelsolin-like	Gelsolin-like
e2nupB1	B:346-415,B:744-838	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e2nupB4	B:416-500	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e2nupB2	B:501-743	HAD domain-like	HAD domain-related	vWA-like
e2nupB5	B:839-943	ERP29 C domain-like	Helical domain of Sec23/24	Helical domain of Sec23/24
e2nupB3	B:944-1093	Gelsolin-like	Gelsolin-like	Gelsolin-like
e2nupC1	C:1-157	Profilin-like	profilin-like	profilin-like

Structural contacts of domain e2nupC1 of H-group "profilin-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2nupB1	C:x,y,z->B:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e2nupB2	C:x,y,z->B:X,Y,Z	HAD domain-related	Interaction Interface Pymol
e2nupB4	C:x,y,z->B:X,Y,Z	Rubredoxin-related	Interaction Interface Pymol
e2nupB1	C:-X+1/2,Y-1/2,-Z+1->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e2nupB4	C:-X+1/2,Y-1/2,-Z+1->B:x,y,z	Rubredoxin-related	Interaction Interface Pymol
e2nupA1	C:x,y,z->A:X,Y,Z	HAD domain-related	Interaction Interface Pymol