ECOD: domain e2o8dB3

Domain ID e2o8dB3

A: alpha bundles
X: Four-helical up-and-down bundle
H: DNA repair protein MutS, domain III
T: DNA repair protein MutS, domain III
F: MutS_III

UID:	001814103
Type:	Automatic domain
Parent:	e1ewqA1
Range:	B:741-840,B:866-1084
PDB:	2o8d
PDB Description:	DNA MISMATCH REPAIR PROTEIN MSH6
UniProt:	P52701
Hsap BLAST neighbor:	P52701
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2o8dB3

Domains in the same chain:

Download Pymol

e2o8dB1	B:362-521	Homing endonucleases-like	DNA repair protein MutS, domain I	DNA repair protein MutS, domain I
e2o8dB2	B:522-740	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2o8dB3	B:741-840,B:866-1084	Four-helical up-and-down bundle	DNA repair protein MutS, domain III	DNA repair protein MutS, domain III
e2o8dB4	B:1085-1335	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e2o8dA7	A:1-125	Homing endonucleases-like	DNA repair protein MutS, domain I	DNA repair protein MutS, domain I
e2o8dA3	A:126-302	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2o8dA6	A:303-616	Four-helical up-and-down bundle	DNA repair protein MutS, domain III	DNA repair protein MutS, domain III
e2o8dA5	A:617-855	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2o8dB1	B:362-521	Homing endonucleases-like	DNA repair protein MutS, domain I	DNA repair protein MutS, domain I
e2o8dB2	B:522-740	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2o8dB3	B:741-840,B:866-1084	Four-helical up-and-down bundle	DNA repair protein MutS, domain III	DNA repair protein MutS, domain III
e2o8dB4	B:1085-1335	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e2o8dB3 of H-group "DNA repair protein MutS, domain III":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2o8dA6	B:x,y,z->A:X,Y,Z	DNA repair protein MutS, domain III	Interaction Interface Pymol
e2o8dB2	B:x,y,z->B:-X-3/4,-Z+1/4,-Y+1/4	Ribonuclease H-like	Interaction Interface Pymol
e2o8dB3	B:x,y,z->B:-X-3/4,-Z+1/4,-Y+1/4	DNA repair protein MutS, domain III	Interaction Interface Pymol
e2o8dB2	B:-X-3/4,-Z+1/4,-Y+1/4->B:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e2o8dB3	B:-X-3/4,-Z+1/4,-Y+1/4->B:x,y,z	DNA repair protein MutS, domain III	Interaction Interface Pymol
e2o8dA6	B:-Z,X+1/2,-Y+1/2->A:x,y,z	DNA repair protein MutS, domain III	Interaction Interface Pymol