Domain ID e2ohcA8

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  • A: a/b three-layered sandwiches
  • X: Restriction endonuclease-like
  • H: tRNA-intron endonuclease catalytic domain-like
  • T: tRNA-intron endonuclease catalytic domain-like
  • F: tRNA_int_endo
UID: 001248057
Type: Automatic domain
Parent: e1a79A2
Range: A:199-289
PDB: 2ohc
PDB Description: tRNA-splicing endonuclease
UniProt: Q9HIY5
Species:

Structure of domain e2ohcA8

Domains in the same chain:

e2ohcA10 A:1-67 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e2ohcA9 A:67-146 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like
e2ohcA11 A:147-198 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e2ohcA8 A:199-289 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like

Domains in the same PDB:

e2ohcA10 A:1-67 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e2ohcA9 A:67-146 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like
e2ohcA11 A:147-198 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e2ohcA8 A:199-289 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like
e2ohcB10 B:2-67 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e2ohcB9 B:67-146 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like
e2ohcB11 B:147-198 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e2ohcB8 B:199-289 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like

Structural contacts of domain e2ohcA8 of H-group "tRNA-intron endonuclease catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ohcB8 A:X,Y,Z->B:x,y,z tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e2ohcB9 A:X,Y,Z->B:x,y,z tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e2ohcB9 A:X-1,Y,Z->B:x,y,z tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e2ohcB11 A:X-1,Y,Z->B:x,y,z tRNA-intron endonuclease N-terminal domain-like Interaction Interface Pymol
e2ohcB8 A:X-1,Y,Z->B:x,y,z tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e2ohcB9 A:-Y+1,-X+2,-Z-5/2->B:x,y,z tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e2ohcB10 A:-Y+1,-X+2,-Z-5/2->B:x,y,z tRNA-intron endonuclease N-terminal domain-like Interaction Interface Pymol
e2ohcB10 A:-Y+2,-X+2,-Z-5/2->B:x,y,z tRNA-intron endonuclease N-terminal domain-like Interaction Interface Pymol