Domain ID e2ohcB11

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  • A: a+b two layers
  • X: Homing endonucleases-like
  • H: tRNA-intron endonuclease N-terminal domain-like
  • T: tRNA-intron endonuclease N-terminal domain-like
  • F: EndA_linker
UID: 001248068
Type: Automatic domain
Parent: e2oheA11
Range: B:147-198
PDB: 2ohc
PDB Description: tRNA-splicing endonuclease
UniProt: Q9HIY5
Species:

Structure of domain e2ohcB11

Domains in the same chain:

e2ohcB10 B:2-67 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e2ohcB9 B:67-146 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like
e2ohcB11 B:147-198 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e2ohcB8 B:199-289 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like

Domains in the same PDB:

e2ohcA10 A:1-67 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e2ohcA9 A:67-146 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like
e2ohcA11 A:147-198 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e2ohcA8 A:199-289 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like
e2ohcB10 B:2-67 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e2ohcB9 B:67-146 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like
e2ohcB11 B:147-198 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e2ohcB8 B:199-289 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like

Structural contacts of domain e2ohcB11 of H-group "tRNA-intron endonuclease N-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ohcA9 B:x,y,z->A:X,Y,Z tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e2ohcA10 B:x,y,z->A:X,Y,Z tRNA-intron endonuclease N-terminal domain-like Interaction Interface Pymol
e2ohcB11 B:x,y,z->B:-Y+1,-X+1,-Z-5/2 tRNA-intron endonuclease N-terminal domain-like Interaction Interface Pymol
e2ohcB8 B:x,y,z->B:-Y+1,-X+1,-Z-5/2 tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e2ohcB8 B:-Y+1,-X+1,-Z-5/2->B:x,y,z tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e2ohcB11 B:-Y+1,-X+1,-Z-5/2->B:x,y,z tRNA-intron endonuclease N-terminal domain-like Interaction Interface Pymol
e2ohcA8 B:x,y,z->A:X-1,Y,Z tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e2ohcA9 B:x,y,z->A:X-1,Y,Z tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e2ohcA10 B:-X+1/2,Y-1/2,-Z-9/4->A:x,y,z tRNA-intron endonuclease N-terminal domain-like Interaction Interface Pymol